DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABG3E

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_175355.1 Gene:RABG3E / 841353 AraportID:AT1G49300 Length:206 Species:Arabidopsis thaliana


Alignment Length:203 Identity:79/203 - (38%)
Similarity:118/203 - (58%) Gaps:15/203 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::|:|||||||:||:.::.:..||..|..|||.||..:.|..|.....||||||||||||::
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEE--IQ---NNCDVVKKVLVGNKND-DPDRKVVI 131
            :...:|||....::||||.:.:||.::..|.||  ||   ::.:....|::|||.| |.....|:
plant    73 LGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVIGNKIDVDGGSSRVV 137

  Fly   132 TEDAQR--FAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQ--KDTLHL-KPNP 191
            :|...|  .|.:.:|..:|||||...|||:.||.||    .:.:::...|:.  .||:.: ..||
plant   138 SEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCIT----TNAMKSGEEEEMYLPDTIDVGTSNP 198

  Fly   192 KGSKGGKC 199
            :.|.|.:|
plant   199 QRSTGCEC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 79/203 (39%)
RABG3ENP_175355.1 Rab7 9..182 CDD:206655 70/176 (40%)

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