DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB18

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_175056.1 Gene:RAB18 / 840987 AraportID:AT1G43890 Length:212 Species:Arabidopsis thaliana


Alignment Length:198 Identity:88/198 - (44%)
Similarity:121/198 - (61%) Gaps:21/198 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
            ||:|||:|:||||||||||||:.|:.:||. ....|||||||::.:.|...::||.|||||||||
plant    10 FDYLFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQER 73

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRR-WLEEI---QNNCDVVKKVLVGNKNDDPDRKVV 130
            |||:||:||||..|:|:|||||..::|.|:.. |.:||   ..|.|.: |:|||||.|....:.|
plant    74 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCI-KMLVGNKVDKESERAV 137

  Fly   131 ITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSK 195
            ..::...||::......|.|||..:|||..|..:..::|:....|:               :||.
plant   138 SKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA---------------EGSS 187

  Fly   196 GGK 198
            |||
plant   188 GGK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 88/198 (44%)
RAB18NP_175056.1 PLN03118 1..200 CDD:215587 88/198 (44%)

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