DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab35 and ARA-2

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_172128.1 Gene:ARA-2 / 837151 AraportID:AT1G06400 Length:216 Species:Arabidopsis thaliana


Alignment Length:207 Identity:88/207 - (42%)
Similarity:127/207 - (61%) Gaps:13/207 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
            :|:||||::|||||||||:||.||:.:.|:....:||||:|..:|..:||..||.||||||||||
plant    10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 74

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKVVITE 133
            :|.|||.||||..|.:::||||...:|.|..|||.|::.:.|. :..:|:|||.|......|.||
plant    75 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTE 139

  Fly   134 DAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKL----------RTSPNEQQKDTLHLK 188
            :|:.||::..:...||||.|..||||.|..:..|:  ||:          .::....:.:|:::|
plant   140 EAKAFAERESLYFMETSALDATNVENAFTEVLTQI--HKIVSKRSVDGGGESADLPGKGETINVK 202

  Fly   189 PNPKGSKGGKCC 200
            .:....|...||
plant   203 EDGSVLKRMGCC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 88/207 (43%)
ARA-2NP_172128.1 Rab11_like 11..175 CDD:206660 81/165 (49%)

Return to query results.
Submit another query.