DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABA5E

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_563750.3 Gene:RABA5E / 837091 AraportID:AT1G05810 Length:264 Species:Arabidopsis thaliana


Alignment Length:206 Identity:85/206 - (41%)
Similarity:127/206 - (61%) Gaps:11/206 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERF 70
            ::|||:::||||.||||:||.|::.:.||.:...||||:|:.::::|||..||.|||||||||||
plant    56 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERF 120

  Fly    71 RTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD-VVKKVLVGNKNDDPDRKVVITED 134
            |.:||.||||..|.:||||:|...:|.:|.|||:|::.:.| .|.::|||||.|..:.:.|..|:
plant   121 RAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEE 185

  Fly   135 AQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN-EQQKDTLHL---------KP 189
            .:..|::..:...||||.|:.||:..|..:...:.::..|...| :..||.|.:         ..
plant   186 GKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNS 250

  Fly   190 NPKGSKGGKCC 200
            ..|.|.|..||
plant   251 ASKQSSGFSCC 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 85/206 (41%)
RABA5ENP_563750.3 Rab11_like 56..220 CDD:206660 75/163 (46%)

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