DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABG3A

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001154217.1 Gene:RABG3A / 826558 AraportID:AT4G09720 Length:217 Species:Arabidopsis thaliana


Alignment Length:219 Identity:77/219 - (35%)
Similarity:110/219 - (50%) Gaps:35/219 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::::|||||||:||:.::....||..|..|||.||..:.:.|....|.||||||||||||::
plant     8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEI----------------QNNCDVVKKVLVGNK 121
            :.:.:|||.....:||||....||.|:..|.||.                .::......:::|||
plant    73 LGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASPSDPKTFPFIVLGNK 137

  Fly   122 ND-DPDRKVVITED--AQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKD 183
            .| |.....|:::.  |...|...:|..|||||||:.||:..||:|.:..|       .||.::|
plant   138 IDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTAL-------ANEHEQD 195

  Fly   184 TLH-------LKPNPKGSKGGKCC 200
            ...       .:..|||  ||..|
plant   196 IYFQGIPDAVTENEPKG--GGCAC 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 77/219 (35%)
RABG3ANP_001154217.1 Rab7 9..193 CDD:206655 69/190 (36%)

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