DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and ARA6

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_567008.1 Gene:ARA6 / 824649 AraportID:AT3G54840 Length:202 Species:Arabidopsis thaliana


Alignment Length:162 Identity:63/162 - (38%)
Similarity:99/162 - (61%) Gaps:4/162 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDI-EGMRVKLQIWDTAGQERFRTI 73
            ||:::||||||||.:::||....|..:...|:|..|..:|:.: :...||.:|||||||||:..:
plant    35 KLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSAL 99

  Fly    74 TSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQ--NNCDVVKKVLVGNKNDDPDRKVVITEDAQ 136
            ...||||....::|||:|:.|||...:.|::|:|  .:.|:| ..|||||.|..:::.|.|||..
plant   100 APLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIV-MALVGNKADLHEKREVPTEDGM 163

  Fly   137 RFAKQMDIELFETSAKDNINVENMFLSITRQV 168
            ..|::..:...|||||...|:..:|..|.:::
plant   164 ELAEKNGMFFIETSAKTADNINQLFEEIGKRL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 63/162 (39%)
ARA6NP_567008.1 Rab5_related 33..196 CDD:206653 63/162 (39%)

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