DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RABC2b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_187602.1 Gene:RABC2b / 820149 AraportID:AT3G09910 Length:205 Species:Arabidopsis thaliana


Alignment Length:203 Identity:85/203 - (41%)
Similarity:125/203 - (61%) Gaps:14/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            |:|..||:|:||||||||||||:.|...:.. ....||||||||:.:.:.|.|:||.||||||||
plant     9 GYDLSFKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQE 72

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRR-WLEEIQ---NNCDVVKKVLVGNKNDDPDRKV 129
            :|||:||:|:||:.|:|:|||||..|:|.|:.. |.:||:   .|.|.: |:|||||.|....:.
plant    73 KFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCI-KMLVGNKVDRESERK 136

  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPN--EQQKDTLHLKPNPK 192
            |..|:....||.::....|.||:...||...|..:..::::     .|:  |:...::..||:.:
plant   137 VSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIME-----VPSLLEEGSSSVKRKPDYR 196

  Fly   193 GSKGGKCC 200
            ..: |:||
plant   197 AHQ-GRCC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 85/203 (42%)
RABC2bNP_187602.1 PLN03118 1..204 CDD:215587 85/203 (42%)

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