DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and ARA4

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_181842.1 Gene:ARA4 / 818915 AraportID:AT2G43130 Length:214 Species:Arabidopsis thaliana


Alignment Length:206 Identity:86/206 - (41%)
Similarity:131/206 - (63%) Gaps:8/206 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            ||.::|||::|||||.||||:||.|::.:.|:.:...||||:|:.:::.|:|..||.||||||||
plant     7 RGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD-VVKKVLVGNKNDDPDRKVVI 131
            ||||.:||.||||..|.:||||:|...:|.||.|||:|:..:.| .|.|:|:|||.|....:.|.
plant    72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVS 136

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQV---LDHKLRTSPNEQQKDTLH----LKP 189
            .|:.:..|:...:...||||.|:.||:..|..:.|::   :..|...|.:.:::.|::    :|.
plant   137 VEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKN 201

  Fly   190 NPKGSKGGKCC 200
            ..:|:|...||
plant   202 ENEGTKTFSCC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 86/206 (42%)
ARA4NP_181842.1 Rab11_like 10..174 CDD:206660 76/163 (47%)

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