DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab35 and RAB7A

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_565521.1 Gene:RAB7A / 816724 AraportID:AT2G21880 Length:212 Species:Arabidopsis thaliana


Alignment Length:204 Identity:72/204 - (35%)
Similarity:115/204 - (56%) Gaps:12/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::::|||||||:||:.::....|:..|..|||.||..:.:.|:...|.||||||||||||::
plant     9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQS 73

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKK-----VLVGNKN--DDPDRKVV 130
            :.:.:|||....::||||.|.:||..:..|..|.....:.::.     ||:|||.  |..:.:||
plant    74 LGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDVDGGNSRVV 138

  Fly   131 ITEDAQRF-AKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS----PNEQQKDTLHLKPN 190
            ..:.|..: ..:.:|...|||||::.|::..|||:....|.::.:.|    |..|..|::....:
plant   139 SNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNERKQSNDIYPRGQYHDSVTDIID 203

  Fly   191 PKGSKGGKC 199
            |..|:|..|
plant   204 PDQSRGCAC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 72/204 (35%)
RAB7ANP_565521.1 Rab7 10..181 CDD:206655 63/170 (37%)

Return to query results.
Submit another query.