DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab26

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_012826040.1 Gene:rab26 / 780350 XenbaseID:XB-GENE-489728 Length:249 Species:Xenopus tropicalis


Alignment Length:202 Identity:94/202 - (46%)
Similarity:137/202 - (67%) Gaps:11/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTF-SGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            :|..||::::|||||||:.||:||.|..| :||:|:|:|:||:.:.::::|::||||||||||||
 Frog    53 YDIAFKVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLNVDGVKVKLQIWDTAGQE 117

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC--DVVKKVLVGNKNDDPDRKVVI 131
            |||::|..|||..|.::::|||||..||.|::.||.||....  ||| .:|:|||.|....:||.
 Frog   118 RFRSVTHAYYRDAHALLLLYDVTNKSSFDNIQAWLTEIHEYAQKDVV-IMLLGNKVDSTHERVVK 181

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLH--LKPNPKGS 194
            .||.:|.||:..:...|||||..:||:..|::|.:: |.|:....||| .|..||  :|   |..
 Frog   182 IEDGERLAKEYGVPFMETSAKSGLNVDLAFIAIAKE-LKHRSMKLPNE-PKFKLHDYVK---KEV 241

  Fly   195 KGGKCCR 201
            ||..||:
 Frog   242 KGSGCCK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 93/200 (47%)
rab26XP_012826040.1 Rab26 57..247 CDD:206695 91/195 (47%)

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