DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rabl2b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001072451.1 Gene:rabl2b / 779905 XenbaseID:XB-GENE-979695 Length:225 Species:Xenopus tropicalis


Alignment Length:163 Identity:50/163 - (30%)
Similarity:87/163 - (53%) Gaps:3/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTIT 74
            |::.:|||.||||.|:.||..|.|....::|..:.....:..::|..|.:..|||||||||.::.
 Frog    23 KIICLGDSAVGKSKLMERFLMDGFRPQQLSTFALTLYKYSTCVDGNTVLVDFWDTAGQERFHSMH 87

  Fly    75 STYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQRFA 139
            ::||...|..|:|:||....::.|:.:|.:|::.....:..::|.||.|...|   :|:....|.
 Frog    88 ASYYHKAHACIMVFDVQRKITYKNLGKWYQELREYRPEIPCIVVANKIDADIR---VTQKGFNFG 149

  Fly   140 KQMDIELFETSAKDNINVENMFLSITRQVLDHK 172
            |:.::..:..||.|..||..:|....:..:.:|
 Frog   150 KKHNLPFYFVSAADGTNVVKLFKDAIKLAVSYK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 50/163 (31%)
rabl2bNP_001072451.1 RabL2 22..182 CDD:133324 49/161 (30%)

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