DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab21

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001070133.1 Gene:rab21 / 767727 ZFINID:ZDB-GENE-060929-1062 Length:216 Species:Danio rerio


Alignment Length:214 Identity:70/214 - (32%)
Similarity:123/214 - (57%) Gaps:19/214 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAG 66
            |.|..:.||::::|:..|||:||::|:.::.|:..:|||:...|..:.::|.|.||.|.||||||
Zfish     4 AGGKTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAG 68

  Fly    67 QERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVV 130
            ||||..:...|||.::|.|:|||||:.:||..|:.|::|::... :.:...:||||.|....:.|
Zfish    69 QERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 133

  Fly   131 ITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSK 195
            ..|:|:.:|:.:..:.:.||||.|..:|.:||.:.:::::    |:..|::........:..|.:
Zfish   134 SVEEAEGYAESVGAKHYHTSAKLNKGIEELFLDLCKRMME----TAQLEERSRGNGASNSSTGRR 194

  Fly   196 G--------------GKCC 200
            |              |.||
Zfish   195 GVQIVDDEPQAAVPAGGCC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 69/213 (32%)
rab21NP_001070133.1 Rab21 11..172 CDD:133323 61/160 (38%)

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