DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab38

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_082514.4 Gene:Rab38 / 72433 MGIID:1919683 Length:211 Species:Mus musculus


Alignment Length:186 Identity:69/186 - (37%)
Similarity:99/186 - (53%) Gaps:36/186 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTV--DIEGMRVKLQIWDTAGQE 68
            :||:|||:|||.||||:|::.|:....||..|..||||||.::.:  |.|.: |:||:||.||||
Mouse     7 EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETV-VRLQLWDIAGQE 70

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQ-----------------NNCDVVKKV 116
            ||..:|..|||...|..:|:|||...:|..|.:|..::.                 |.||..|.|
Mouse    71 RFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCDQGKDV 135

  Fly   117 LVGN--KNDDPDRKVVITEDAQRFAKQMD-IELFETSAKDNINVENMFLSITRQVL 169
            |:.|  |.|             :|.|:.. :..||||||:|||::.....:.:.:|
Mouse   136 LMNNGLKMD-------------QFCKEHGFVGWFETSAKENINIDEASRCLVKHIL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 69/186 (37%)
Rab38NP_082514.4 Rab32_Rab38 10..208 CDD:206692 67/183 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q13637 32..46 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q13637 68..81 7/12 (58%)

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