DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB17

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_016860182.1 Gene:RAB17 / 64284 HGNCID:16523 Length:338 Species:Homo sapiens


Alignment Length:133 Identity:49/133 - (36%)
Similarity:82/133 - (61%) Gaps:4/133 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            :|||:::|...||||||.:|:..:.|. |.:.|:|..|..:.||:....:||:||||||||::.:
Human    19 VFKLVLLGSGSVGKSSLALRYVKNDFK-SILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHS 82

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC--DVVKKVLVGNKND-DPDRKVVITED 134
            :...|:||.:..::|||:|..:||...::||::::...  ..|..:|||||.| ..:|:|.....
Human    83 VCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQVP 147

  Fly   135 AQR 137
            .:|
Human   148 PRR 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 49/133 (37%)
RAB17XP_016860182.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..>146 CDD:476819 48/126 (38%)

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