DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab28

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001025601.1 Gene:rab28 / 594989 XenbaseID:XB-GENE-478294 Length:221 Species:Xenopus tropicalis


Alignment Length:189 Identity:62/189 - (32%)
Similarity:98/189 - (51%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEG-MRVKLQIWDTAGQER 69
            |...|::|:||...||:||.:||:.::|...|..|:|:||.::.:.:.| :.|.||:.|..||..
 Frog    10 DRQIKIVILGDGACGKTSLAMRFAQESFGKQYKQTVGIDFFLKRITLPGNLNVTLQVLDIGGQTI 74

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKV-----------LVGNKND 123
            ...:...|..||.||::|||:||.:||.|:..|.       .:||||           |||||.|
 Frog    75 GGKMLDKYIYGTQGVLLVYDITNYQSFENLEDWF-------SMVKKVNDESETQPFVALVGNKID 132

  Fly   124 DPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQK 182
            ....:.|..:..|||.::.::..:..|||...:|...|..:..::|..||..:..||.:
 Frog   133 LEHMRTVKADKHQRFCQENNLGSYFVSAKTGDSVFLCFQRVAAEILGIKLNKAEIEQSQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 62/189 (33%)
rab28NP_001025601.1 Rab28 13..221 CDD:206694 61/186 (33%)

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