DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB27A

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_004571.2 Gene:RAB27A / 5873 HGNCID:9766 Length:221 Species:Homo sapiens


Alignment Length:165 Identity:69/165 - (41%)
Similarity:109/165 - (66%) Gaps:12/165 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDI----------EGMRVKL 59
            :|:|.|.|.:|||||||:|:|.:::|..|:..:|||:|:||:.:.|..          .|.|:.|
Human     6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQRIHL 70

  Fly    60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNN--CDVVKKVLVGNKN 122
            |:||||||||||::|:.::|...|.::::|:||.:||.|||.|:.::|.:  |:....||.|||:
Human    71 QLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKS 135

  Fly   123 DDPDRKVVITEDAQRFAKQMDIELFETSAKDNINV 157
            |..|::||..|:|...|::..|..|||||.:..|:
Human   136 DLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNI 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 69/165 (42%)
RAB27ANP_004571.2 Rab27A 6..185 CDD:206700 69/165 (42%)
Effector region. /evidence=ECO:0000250 38..46 4/7 (57%)

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