DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB13

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002861.1 Gene:RAB13 / 5872 HGNCID:9762 Length:203 Species:Homo sapiens


Alignment Length:201 Identity:101/201 - (50%)
Similarity:143/201 - (71%) Gaps:3/201 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||:.:|||||||:||||||||:.|:|||::|.|:.:||:|||:|||||||||||.::|||:||||
Human     1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129
            |||||:|||:.||||..|:|:|||:|:.:||.|::.|::.|:.|... |:::|:|||.|...::.
Human    66 GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRK 130

  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQV-LDHKLRTSPNEQQKDTLHLKPNPKG 193
            |..|.|.:.|::..|..||||||.::||:..|.|:.|.: |....|.|.|..:..:..||...| 
Human   131 VQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKTCDK- 194

  Fly   194 SKGGKC 199
            ....||
Human   195 KNTNKC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 99/199 (50%)
RAB13NP_002861.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 90/165 (55%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 7/13 (54%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 13/16 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 8/29 (28%)

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