DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB3A

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002857.1 Gene:RAB3A / 5864 HGNCID:9777 Length:220 Species:Homo sapiens


Alignment Length:196 Identity:89/196 - (45%)
Similarity:131/196 - (66%) Gaps:9/196 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            :.||::||:||||:|.|||:|.|.|::||:|:.::::|:|:|||::|:.....|:||||||||||
Human    17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 81

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDVVKKVLVGNKNDDPDRKVVI 131
            ||:||||:.||||..|.|::||:||.|||..|:.|..:|:. :.|..:.:|||||.|..|.:||.
Human    82 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVS 146

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKG 196
            :|..::.|..:..|.||.||||||||:..|..:. .|:..|:     .:..||  ..|...|:|.
Human   147 SERGRQLADHLGFEFFEASAKDNINVKQTFERLV-DVICEKM-----SESLDT--ADPAVTGAKQ 203

  Fly   197 G 197
            |
Human   204 G 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 89/196 (45%)
RAB3ANP_002857.1 Rab3 22..186 CDD:206657 80/164 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 2/8 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 12/15 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..220 4/11 (36%)

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