DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab8a

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001083031.1 Gene:rab8a / 571897 ZFINID:ZDB-GENE-070424-36 Length:207 Species:Danio rerio


Alignment Length:201 Identity:96/201 - (47%)
Similarity:143/201 - (71%) Gaps:17/201 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||:.:|:|||||:||||||||:.:|.|||:|.|:.::|:|||:||||||::::|.::||||||||
Zfish     1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129
            |||||||||:.||||..|:::|||:||.:||.|::.|:..|:.:... |:|:::|||.|..:::.
Zfish    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKCDINEKRQ 130

  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQV---LDHKLRTSPNEQQKDTLHLKPNP 191
            |..:..::.|.:..|:..|||||.||||||.||::.|.:   :|.||..:             ||
Zfish   131 VSKDRGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDTKLEGN-------------NP 182

  Fly   192 KGSKGG 197
            :||..|
Zfish   183 QGSNHG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 94/199 (47%)
rab8aNP_001083031.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 86/165 (52%)

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