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Protein Alignment Rab35 and Rab43
DIOPT Version :9
Sequence 1: | NP_001188678.1 |
Gene: | Rab35 / 33014 |
FlyBaseID: | FBgn0031090 |
Length: | 201 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001019502.1 |
Gene: | Rab43 / 500249 |
RGDID: | 1565300 |
Length: | 210 |
Species: | Rattus norvegicus |
Alignment Length: | 192 |
Identity: | 83/192 - (43%) |
Similarity: | 126/192 - (65%) |
Gaps: | 8/192 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
:|.||||:::||:.|||:.::.||....||....:||||||.::|::|:|.||||||||||||||
Rat 13 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 77
Fly 70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN--NCDVVKKVLVGNKNDDPDRKVVIT 132
|||||.:|||..:|.|:.||::...:|.:|..|:|:::. ..::| ::|:|||:|..|.:.|..
Rat 78 FRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIV-QLLIGNKSDLADLREVPL 141
Fly 133 EDAQRFAKQMDIE-LFETSAKDNINVENMFLSI-TRQVLDHKLRTSPNEQQKDTLHLKPNPK 192
.:||..|:..||. ..||||||:.|||..|..: |..::.| ..|...:|:|.|::.:.|
Rat 142 AEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMRH---GGPMFSEKNTDHIQLDSK 200
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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