DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and zgc:100918

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001005591.1 Gene:zgc:100918 / 449549 ZFINID:ZDB-GENE-040927-2 Length:205 Species:Danio rerio


Alignment Length:198 Identity:75/198 - (37%)
Similarity:115/198 - (58%) Gaps:8/198 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::|:|||||||:||:.::.:..||..|..|||.||..:.|.::...|.:|||||||||||::
Zfish     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEE--IQ---NNCDVVKKVLVGNKNDDPDRKVVIT 132
            :...:|||....::|||||...:|..:..|.:|  ||   .:.:....|::|||.|..:|:|. |
Zfish    73 LGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVT-T 136

  Fly   133 EDAQRFAK-QMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKG 196
            :.||.:.: :.:|..||||||:.|||:..|.:|.|..|..:......: ..|.:.|:.:...|.|
Zfish   137 KRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEVETYD-FPDQIKLRDDRPVSSG 200

  Fly   197 GKC 199
            ..|
Zfish   201 DGC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 75/198 (38%)
zgc:100918NP_001005591.1 Rab7 9..179 CDD:206655 69/170 (41%)

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