DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab11bb

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001002555.1 Gene:rab11bb / 436828 ZFINID:ZDB-GENE-040718-293 Length:218 Species:Danio rerio


Alignment Length:212 Identity:87/212 - (41%)
Similarity:132/212 - (62%) Gaps:18/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
            :|.|||:::|||||||||:||.||:.:.|:....:||||:|..|::.::|..:|.||||||||||
Zfish     8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD---VVKKVLVGNKNDDPDRKVVI 131
            :|.|||.||||..|.::|||:....::.||.|||:|::::.|   |:  :|||||:|....:.|.
Zfish    73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI--MLVGNKSDLRHLRAVP 135

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSI---------TRQVLDHKLR-TSPNEQQKDTLH 186
            |::|:.||::.::...||||.|:.|||..|.:|         .:|:.:.... .||.....| :.
Zfish   136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGNNVVD-IS 199

  Fly   187 LKPNPKGSKGGK--CCR 201
            :.|...|.|..|  ||:
Zfish   200 VPPTTDGQKSNKLQCCQ 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 86/210 (41%)
rab11bbNP_001002555.1 Rab11_like 9..173 CDD:206660 77/165 (47%)

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