DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RabX4

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_733043.1 Gene:RabX4 / 42960 FlyBaseID:FBgn0051118 Length:213 Species:Drosophila melanogaster


Alignment Length:202 Identity:90/202 - (44%)
Similarity:136/202 - (67%) Gaps:12/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||..|...:|:|::|||.|||:.::.|:.|:.:..:||:|||:|||.:.::::|:.:||||||||
  Fly     1 MALDFVATYKVLVLGDSNVGKTCIVHRYCDEKYYDTYISTIGIDFKQKLINLDGVPIKLQIWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC--DVVKKVLVGNKND-DPDR 127
            |||||||:|:.||||..|::::|||||.||:.|:..||..||.|.  ||| |||.|||.: ...:
  Fly    66 GQERFRTLTTAYYRGAMGILLMYDVTNLESYNNLSYWLRNIQENASPDVV-KVLAGNKCECSATQ 129

  Fly   128 KVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS---PNEQQKDTLHLKP 189
            ::|..|..::.|:..|:..||.|.|.|||:|:.|||:.|::.:.:.|..   .|::.||    |.
  Fly   130 RMVDKERGEKIAENFDMPFFEVSCKSNINIEDAFLSLARKIREQRERRGDNFDNDESKD----KK 190

  Fly   190 NPKGSKG 196
            :| ||.|
  Fly   191 SP-GSNG 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 88/200 (44%)
RabX4NP_733043.1 RAB 9..170 CDD:197555 78/161 (48%)

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