DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab7a

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_957222.1 Gene:rab7a / 393902 ZFINID:ZDB-GENE-040426-1352 Length:207 Species:Danio rerio


Alignment Length:199 Identity:73/199 - (36%)
Similarity:114/199 - (57%) Gaps:7/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::|:|||||||:||:.::.:..||..|..|||.||..:.|.::...|.:|||||||||||::
Zfish     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEE--IQ---NNCDVVKKVLVGNKNDDPDRKVVIT 132
            :...:|||....::|:|||...:|..:..|.:|  ||   .:.:....|::|||.|..:|:|. |
Zfish    73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVT-T 136

  Fly   133 EDAQRFAK-QMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKG 196
            :.||.:.: :.:|..||||||:.||||..|.:|.|..|..:.......:..:.:.|..|.:....
Zfish   137 KRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDRNDRAKPS 201

  Fly   197 GKCC 200
            .:.|
Zfish   202 AETC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 73/199 (37%)
rab7aNP_957222.1 Rab7 9..179 CDD:206655 69/170 (41%)

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