DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and glo-1

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001024837.1 Gene:glo-1 / 3565633 WormBaseID:WBGene00011083 Length:212 Species:Caenorhabditis elegans


Alignment Length:210 Identity:70/210 - (33%)
Similarity:107/210 - (50%) Gaps:27/210 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDF--KIRTVDIEGMRVKLQIWDTAGQERFR 71
            :|:|:|||.||||:|::.||..:.||.:|.|||||||  ||..|| |...|.|||||.:||:|:.
 Worm    12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVD-ENTVVHLQIWDISGQDRYG 75

  Fly    72 TITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-----VKKVLVGNKNDDPDRKVVI 131
            .:|..||:..|..|:|.|.|...:.....||..::.....:     |..:|:.||.|..::   :
 Worm    76 VMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNK---L 137

  Fly   132 TEDAQRFAKQMDIEL-------FETSAKDNINVENMFLSITRQVLDHKLRTS---PNEQQKDTLH 186
            .:|     |..|:|.       |.||||:::.:|..|..:...|:..:....   |...::..::
 Worm   138 GDD-----KLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTVISTEQGGQYDVPFMNREGNVN 197

  Fly   187 LKPNPKGSK-GGKCC 200
            |..|...|: ..|||
 Worm   198 LDDNTTHSRYDSKCC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 70/210 (33%)
glo-1NP_001024837.1 Rab32_Rab38 12..212 CDD:206692 68/208 (33%)

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