DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab9E

DIOPT Version :9

Sequence 1:NP_001188678.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_727438.1 Gene:Rab9E / 318148 FlyBaseID:FBgn0052673 Length:197 Species:Drosophila melanogaster


Alignment Length:171 Identity:67/171 - (39%)
Similarity:112/171 - (65%) Gaps:3/171 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRV--KLQIWDTAGQ 67
            :|:.||::|:|||||||:.||:||||:.|:..:.:|:|:|.:..:|:....|:  .||:|||:..
  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTTRHRSTLGMDRRECSVEFADWRMGRMLQVWDTSDD 68

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVVI 131
            |||:.:.:|:.|..||:::|||:|:.:||.|:..|::||:..| |.|..:|||||:|||:.:.|.
  Fly    69 ERFKLLKATHCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVIVLLVGNKSDDPNHRQVS 133

  Fly   132 TEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHK 172
            ......:|.:..|...|.|||...||.::|.|:...:..::
  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYR 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_001188678.1 Rab35 3..201 CDD:133310 67/171 (39%)
Rab9ENP_727438.1 RAB 8..171 CDD:197555 66/162 (41%)
Rab 8..167 CDD:206640 66/158 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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