DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab2b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_063130300.1 Gene:Rab2b / 305853 RGDID:1309117 Length:225 Species:Rattus norvegicus


Alignment Length:208 Identity:80/208 - (38%)
Similarity:126/208 - (60%) Gaps:14/208 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDT----- 64
            :.:|||.:||||:|||||.||::|:|..|...:..||||:|..|.|:|:|.::|||||||     
  Rat     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTNSEPE 67

  Fly    65 -----AGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEI-QNNCDVVKKVLVGNKND 123
                 ||||.||:||.:||||..|.::|||:|..|:|.::..|||:. |::...:..:|:|||:|
  Rat    68 PSYLQAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 132

  Fly   124 DPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLK 188
            ...|:.|..|:.:.||::..:...|||||...|||..:::..::: ..|::....:...:...:|
  Rat   133 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEI-HRKIQQGLFDVHNEANGIK 196

  Fly   189 PNPKGSKG--GKC 199
            ..|:.|..  |.|
  Rat   197 IGPQQSISLVGPC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 80/208 (38%)
Rab2bXP_063130300.1 None

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