DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab7a

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_076440.1 Gene:Rab7a / 29448 RGDID:61908 Length:207 Species:Rattus norvegicus


Alignment Length:199 Identity:73/199 - (36%)
Similarity:113/199 - (56%) Gaps:7/199 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::|:|||||||:||:.::.:..||..|..|||.||..:.|.::...|.:|||||||||||::
  Rat     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEE--IQ---NNCDVVKKVLVGNKNDDPDRKVVIT 132
            :...:|||....::|:|||...:|..:..|.:|  ||   .:.:....|::|||.|..:|:|. |
  Rat    73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVA-T 136

  Fly   133 EDAQRFA-KQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKG 196
            :.||.:. .:.:|..||||||:.||||..|.:|.|..|..:.......:..:.:.|..|.:....
  Rat   137 KRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNERAKAS 201

  Fly   197 GKCC 200
            .:.|
  Rat   202 AESC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 73/199 (37%)
Rab7aNP_076440.1 Rab7 9..179 CDD:206655 69/170 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41 3/12 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82 7/14 (50%)

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