Protein Alignment Rab35 and Rab42

DIOPT Version :10

• Sequence 1: NP_608373.1
• Gene: Rab35 / 33014
• FlyBaseID: FBgn0031090
• Length: 201
• Species: Drosophila melanogaster
• Sequence 2: XP_006538910.1
• Gene: Rab42 / 242681
• MGIID: 2441753
• Length: 219
• Species: Mus musculus
• Alignment Length: 226
• Identity: 80/226 - (35%)
• Similarity: 122/226 - (53%)
• Gaps: 39/226 - (17%)

  Fly     2 ARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYIT------------TIGVDFKIRTVDI-E 53
            |.|..:.|::.::||:||||:|||         ..|:.            |:||:|..|.:.: .
Mouse     3 AAGCSYQFRIALLGDAGVGKTSLL---------RCYVAGARGAAEPDPEPTVGVEFYSRALQLPA 58

  Fly    54 GMRVKLQIWDTAGQERFR----TITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEI--QNNCDV 112
            |:|||||:|||||||.||    .||.::||...||::|:||||.|||.:::.|.:|:  ....|.
Mouse    59 GLRVKLQLWDTAGQECFRCGEKCITRSFYRNMVGVLLVFDVTNRESFEHIQAWHQEVVSTQGPDK 123

  Fly   113 VKKVLVGNKNDDPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSP 177
            |..:|||:| .|.:.:.|.:::|:..|..:.:...|||||.|.||:..|.::| ..::..|:...
Mouse   124 VVFLLVGHK-CDLNTRCVSSQEAEELAASLGMGFMETSAKSNCNVDLAFDTVT-SAIEQALQQGD 186

  Fly   178 NEQQKD-----TLHLKPNPKGSK----GGKC 199
            .:..||     .||..|||:.|.    .|.|
Mouse   187 IKLDKDWAGVRLLHRSPNPRSSSRKQDSGTC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab35	NP_608373.1	Rab35	3..201	CDD:133310	79/225 (35%)
Rab42	XP_006538910.1	P-loop containing Nucleoside Triphosphate Hydrolases	8..219	CDD:476819	78/221 (35%)