DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB21

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_055814.1 Gene:RAB21 / 23011 HGNCID:18263 Length:225 Species:Homo sapiens


Alignment Length:210 Identity:68/210 - (32%)
Similarity:125/210 - (59%) Gaps:11/210 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAG 66
            |.|..:.||::::|:..|||:||::|:.::.|:..:|||:...|..:.::|.|.||.|.||||||
Human    13 AAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAG 77

  Fly    67 QERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVV 130
            ||||..:...|||.::|.|:|||:|:.:||..|:.|::|::... :.:...:||||.|....:.|
Human    78 QERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHV 142

  Fly   131 ITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVL-----DHKLR----TSPNEQQKDTLH 186
            ..::|:.:|:.:..:.:.||||.|..:|.:||.:.::::     |.:.:    :.|...::....
Human   143 SIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQI 207

  Fly   187 LKPNPKG-SKGGKCC 200
            :...|:. :.||.||
Human   208 IDDEPQAQTSGGGCC 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 67/209 (32%)
RAB21NP_055814.1 Rab21 20..181 CDD:133323 59/160 (37%)

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