DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RAB12

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:198 Identity:85/198 - (42%)
Similarity:130/198 - (65%) Gaps:13/198 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            |..|...:::|||..||||:||:.||:||||..:..:|:||||||:||::.|.:::|||||||||
Human   133 RPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 197

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKND-DPDRKVV 130
            |||.:|||.|||...|:|:|||:|..|:|.::.:|::.|.... :..:.:|||||.| :.||::.
Human   198 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREIT 262

  Fly   131 ITEDAQRFAKQM-DIELFETSAKDNINVENMFLSITRQVLDHKLRTSP-----NEQQKDTLHLKP 189
             .:..::||:|: .:...|.|||||.||:.:||    :::|..|:..|     ||.....|.|:|
Human   263 -RQQGEKFAQQITGMRFCEASAKDNFNVDEIFL----KLVDDILKKMPLDILRNELSNSILSLQP 322

  Fly   190 NPK 192
            .|:
Human   323 EPE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 85/198 (43%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 83/192 (43%)

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