DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab5b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_803130.1 Gene:Rab5b / 19344 MGIID:105938 Length:215 Species:Mus musculus


Alignment Length:161 Identity:67/161 - (41%)
Similarity:103/161 - (63%) Gaps:1/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTI 73
            |||:::|:|.||||||::||....|.....:|||..|..::|.::...||.:|||||||||:.::
Mouse    21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    74 TSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCD-VVKKVLVGNKNDDPDRKVVITEDAQR 137
            ...||||....|||||:||.|:||..:.|::|:|.... .:...|.|||.|..::::|..|:||.
Mouse    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150

  Fly   138 FAKQMDIELFETSAKDNINVENMFLSITRQV 168
            :|....:...|||||..:||.::||:|.:::
Mouse   151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 67/161 (42%)
Rab5bNP_803130.1 Rab5_related 20..182 CDD:206653 67/161 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93 8/15 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..215
Blue background indicates that the domain is not in the aligned region.

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