DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab19

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:187 Identity:73/187 - (39%)
Similarity:122/187 - (65%) Gaps:19/187 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERF 70
            |:|||:::||||.|||:.::..|....:|.|...||||||.:|:::|:|.:||:|:|||||||||
Mouse    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERF 79

  Fly    71 RTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN----NCDVVKKVLVGNKNDDPDRKVVI 131
            ||||.:|||..|..|:.||:|...:|.:|..|:.||:.    |..:   :|:|||:|..:::.|:
Mouse    80 RTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVI---MLIGNKSDLWEKRHVL 141

  Fly   132 TEDAQRFAKQMD-IELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHL 187
            .|||...|::.. :.:.|||||::.|::.:|:.:.::::           .:::|||
Mouse   142 FEDACTLAEKHGLLAVLETSAKESRNIDEVFVLMAKELI-----------ARNSLHL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 73/187 (39%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 70/166 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 6/14 (43%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 12/14 (86%)

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