DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab12

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_077768.3 Gene:Rab12 / 19328 MGIID:894284 Length:291 Species:Mus musculus


Alignment Length:197 Identity:83/197 - (42%)
Similarity:127/197 - (64%) Gaps:11/197 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            |..|...:::|||..||||:||:.||:||||..:..:|:||||||:||::.|.:::|||||||||
Mouse    84 RPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQ 148

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVVI 131
            |||.:|||.|||...|:|:|||:|..|:|.::.:|::.|.... :..:.:|||||.|....:.:.
Mouse   149 ERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREIS 213

  Fly   132 TEDAQRFAKQM-DIELFETSAKDNINVENMFLSITRQVLDHKLRTSP-----NEQQKDTLHLKPN 190
            .:..::||:|: .:...|.|||||.||:.:||    :::|..|:..|     ||.....|.|:|.
Mouse   214 RQQGEKFAQQITGMRFCEASAKDNFNVDEIFL----KLVDDILKKMPLDVLRNELSNSILSLQPE 274

  Fly   191 PK 192
            |:
Mouse   275 PE 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 83/197 (42%)
Rab12NP_077768.3 Rab12 90..291 CDD:206699 81/191 (42%)

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