DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab-19

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001370091.1 Gene:rab-19 / 178301 WormBaseID:WBGene00004278 Length:210 Species:Caenorhabditis elegans


Alignment Length:204 Identity:83/204 - (40%)
Similarity:128/204 - (62%) Gaps:7/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            |||:|||::::||.||||:.::.||.:.||.....|||||||.::|:.::|.|||||||||.|||
 Worm     6 GFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQE 70

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDVVKKVLVGNKNDDPDRKVVIT 132
            ||||||.:|||..:|:::.||:|..:||.:::||::::.. ....|.|:|:|.|.|..|::.:..
 Worm    71 RFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEA 135

  Fly   133 EDAQRFAKQMDI-ELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQ-QKDTLHL---KPNPK 192
            |:|:...:...: .:.|||||.|:||:|.||.:. .:|..:......|| ...|..|   .....
 Worm   136 EEAEMLQRANGMFAMLETSAKGNVNVDNAFLELA-TILKRQYDQGVVEQGSSGTFQLGSGGTTAL 199

  Fly   193 GSKGGKCCR 201
            ||...:||:
 Worm   200 GSPWQRCCQ 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 82/202 (41%)
rab-19NP_001370091.1 Rab19 8..172 CDD:133267 72/164 (44%)

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