DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab26

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_038941050.1 Gene:Rab26 / 171111 RGDID:620890 Length:328 Species:Rattus norvegicus


Alignment Length:271 Identity:80/271 - (29%)
Similarity:127/271 - (46%) Gaps:78/271 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTF-SGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            :|..||::::|||||||:.||:||.|..| :|::|:|:|:||:.:.:|::||:||||||||||||
  Rat    61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQE 125

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTN------------------------------------GESFA 97
            |||::|..|||..|||..:..|::                                    ||...
  Rat   126 RFRSVTHAYYRDAHGVSSLLSVSSTVAALRHHQQRFLRQHPGLVDRNPGICPAGRGAHAVGEQGG 190

  Fly    98 NVRR----WLEEIQNNCDVVKKVLVGNKNDDPDRKVVITEDAQRFAK------------------ 140
            |:.:    |.....:...:.|.:.:| :.|....:||..||.::.||                  
  Rat   191 NLGQSSPSWPHRACHGLALTKSLCLG-QVDSTQERVVKREDGEKLAKVSQNREGEEGLLEIVTLG 254

  Fly   141 ---------------QMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPN 190
                           :..:...|||||..:||:..|.:|.:: |..:...:|:| .:..||....
  Rat   255 PPPYAQHLAGSSYLQEYGLPFMETSAKSGLNVDLAFTAIAKE-LKQRSTKAPSE-PRFRLHDYVK 317

  Fly   191 PKGSKGGKCCR 201
            .:| :|..|||
  Rat   318 REG-RGVSCCR 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 78/269 (29%)
Rab26XP_038941050.1 P-loop containing Nucleoside Triphosphate Hydrolases 65..326 CDD:476819 76/264 (29%)

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