DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and RabX6

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_309994.4 Gene:RabX6 / 1271237 VectorBaseID:AGAMI1_008466 Length:210 Species:Anopheles gambiae


Alignment Length:198 Identity:57/198 - (28%)
Similarity:96/198 - (48%) Gaps:27/198 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTF--SGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |:::.|:.||||||:..||:.:.|  :....:|:|:|...||..:....:|||:|||.|.||..:
Mosquito    11 KIILCGEYGVGKSSIFRRFATNNFVTAADRKSTLGLDHYGRTFTVGDKEIKLQLWDTGGMERVAS 75

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKND------DPDRKVVI 131
            :||:||:.....|:|:.:.|..||..:.:.:.::....:..|..|||||.|      ||.   |.
Mosquito    76 VTSSYYKFAEAAILVFALDNESSFHALSQHMLDVVTYAENAKIFLVGNKVDLESSSTDPP---VT 137

  Fly   132 TEDAQRFAKQ---MDIELFETSAKDNINVENMFLSITRQVLD-------------HKLRTSPNEQ 180
            ..|.:.|.:|   :....::||.|....:|.||..|...:::             |..:..|.::
Mosquito   138 DADMESFCEQCHSLISATYKTSCKTGDGLEEMFRDIAGTLVESNRSRLELQALESHGFKIHPPDE 202

  Fly   181 QKD 183
            ..|
Mosquito   203 VND 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 57/198 (29%)
RabX6XP_309994.4 None

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