DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and Rab28

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_446430.1 Gene:Rab28 / 117049 RGDID:620891 Length:221 Species:Rattus norvegicus


Alignment Length:189 Identity:61/189 - (32%)
Similarity:91/189 - (48%) Gaps:19/189 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEG-MRVKLQIWDTAGQER 69
            |...|::::||...||:||...|:.:||...|..|||:||.:|.:.:.| :.|.||:||..||..
  Rat    10 DRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTI 74

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKV-----------LVGNKND 123
            ...:...|..|..|:::|||:||.:||.|:..|.       .|||.|           |||||.|
  Rat    75 GGKMLDKYIYGAQGILLVYDITNYQSFENLEDWY-------SVVKTVSEESETQPLVALVGNKID 132

  Fly   124 DPDRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQK 182
            ....:.|..:...||.::........|||...:|...|..:..::|..||..:..||.:
  Rat   133 LEHMRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIKLNKAEIEQSQ 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 61/189 (32%)
Rab28NP_446430.1 Rab28 13..221 CDD:206694 60/186 (32%)
Switch I. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 35..49 6/13 (46%)
Switch II. /evidence=ECO:0000255|PROSITE-ProRule:PRU00753 68..85 4/16 (25%)

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