DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and XB5873314

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_004916872.1 Gene:XB5873314 / 100496061 XenbaseID:XB-GENE-5873315 Length:210 Species:Xenopus tropicalis


Alignment Length:210 Identity:76/210 - (36%)
Similarity:117/210 - (55%) Gaps:26/210 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTV--DIEGMRVKLQIWDTAGQERF 70
            |.|:|::||.||||:|::.|:..:.||..|..||||||.::.|  |:..| |:||:||.||||||
 Frog    10 LCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLNTM-VRLQLWDIAGQERF 73

  Fly    71 RTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-----NCDVVKKVLVGNKNDDPDRKVV 130
            ..:|..|||...|.:||.|:....:..:|.||.|::.:     |.:.:..:|:|||.|    :|.
 Frog    74 GHMTRLYYREAVGALVVCDLGRVATVESVSRWKEDLDSKVCLQNGNPIPVILLGNKCD----QVP 134

  Fly   131 ITEDAQRFAKQMDIEL-----FETSAKDNINVENMFLSITRQVL----DHKLRTSPNEQQKDTLH 186
            :...|... :|:..||     ..||||:|:|:|....|:.::::    |::.|..||..| .:||
 Frog   135 LGTSASNL-EQLGEELGFSHSHMTSAKENVNIEMAISSLIKEMIANDEDYEPRNDPNIIQ-PSLH 197

  Fly   187 LKPNPKGSKGGKCCR 201
            ...|...|   :|.|
 Frog   198 PSVNKACS---QCSR 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 75/208 (36%)
XB5873314XP_004916872.1 Rab32_Rab38 12..207 CDD:206692 73/204 (36%)

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