DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and cracr2aa

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_002667614.6 Gene:cracr2aa / 100330395 ZFINID:ZDB-GENE-110427-1 Length:718 Species:Danio rerio


Alignment Length:198 Identity:73/198 - (36%)
Similarity:121/198 - (61%) Gaps:8/198 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
            |.|.|||::::|:|.|||:|||.||.||.|......|:|:|:.::|:.::..::.||:|||||||
Zfish   528 GPDRLFKVVLVGNSSVGKTSLLRRFCDDCFHSGTCATVGIDYSVKTLSVDNSQIALQMWDTAGQE 592

  Fly    69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVVIT 132
            |:|:||..::|...||:||||:||.::|..||:||..:|... :.:..:|:|||.|...::|:..
Zfish   593 RYRSITKQFFRKADGVVVVYDITNEQTFTAVRQWLASVQEGAGEDIPIMLLGNKTDLDSQRVIPL 657

  Fly   133 EDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGSKGG 197
            ...::.||...:..:|.||..|.||.:..:.:.|     .|:...:.:::.|:.|..:|  ||..
Zfish   658 GLGEKLAKDFQLMFYECSAFSNHNVTDSMIHMAR-----ILKEQEDREKEKTVSLVDSP--SKKK 715

  Fly   198 KCC 200
            .||
Zfish   716 SCC 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 73/198 (37%)
cracr2aaXP_002667614.6 None

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