Protein Alignment Rab35 and Rab1b

DIOPT Version :9

• Sequence 1: NP_001188678.1
• Gene: Rab35 / 33014
• FlyBaseID: FBgn0031090
• Length: 201
• Species: Drosophila melanogaster
• Sequence 2: NP_001103449.1
• Gene: Rab1b / 100126191
• RGDID: 1642882
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 200
• Identity: 108/200 - (54%)
• Similarity: 144/200 - (72%)
• Gaps: 7/200 - (3%)

  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
            :|:|||||:|||||||||.||:||:|||::.|||:||||||||||::::|..:||||||||||||
  Rat     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNC-DVVKKVLVGNKNDDPDRKVVITE 133
            ||||||:||||.||:|||||||:.||:|||::||:||.... :.|.|:|||||:|...:|||...
  Rat    70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNT 134

  Fly   134 DAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQ---QKDTLHLKPNPKGSK 195
            .|:.||..:.:...|||||:..|||..|:::..::   |.|..|...   ::..|.:...|..|.
  Rat   135 TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAASGGERPNLKIDSTPVKSA 196

  Fly   196 GGKCC 200
            .|.||
  Rat   197 SGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab35	NP_001188678.1	Rab35	3..201	CDD:133310	107/199 (54%)
Rab1b	NP_001103449.1	Rab1_Ypt1	7..172	CDD:206661	99/167 (59%)
		Effector region. /evidence=ECO:0000255	37..45		6/7 (86%)
		Switch 2 region, required for interaction with REP1/CHM. /evidence=ECO:0000250|UniProtKB:Q9H0U4	64..83		16/18 (89%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	173..201		5/27 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920