DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab8b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001092729.1 Gene:rab8b / 100093706 ZFINID:ZDB-GENE-070620-16 Length:209 Species:Danio rerio


Alignment Length:198 Identity:94/198 - (47%)
Similarity:139/198 - (70%) Gaps:11/198 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTA 65
            ||:.:|:|||||:||||||||:.||.|||:|.|:.::|:|||:||||||::::|.::||||||||
Zfish     1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTA 65

  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-VKKVLVGNKNDDPDRKV 129
            |||||||||:.||||..|:::|||:||.:||.|::.|:..|:.:... |:::::|||.|..|::.
Zfish    66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQ 130

  Fly   130 VITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHLKPNPKGS 194
            |..|..::.|....|:..|||||.:.|||..|:::.|.::. :|....||.         ||.|.
Zfish   131 VSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMT-RLNRKMNEN---------NPSGG 185

  Fly   195 KGG 197
            .||
Zfish   186 GGG 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 92/196 (47%)
rab8bNP_001092729.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/166 (51%)

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