DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and si:dkey-16l2.16

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_021327130.1 Gene:si:dkey-16l2.16 / 100003902 ZFINID:ZDB-GENE-141219-36 Length:209 Species:Danio rerio


Alignment Length:206 Identity:135/206 - (65%)
Similarity:163/206 - (79%) Gaps:8/206 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RGFDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQ 67
            :.:.|||||||||||.|||||||:||:|::||||||||||||||||||:|:|.||||||||||||
Zfish     4 KDYHHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEIDGERVKLQIWDTAGQ 68

  Fly    68 ERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDDPDRKVVIT 132
            ||||||||||||.|||||:||||||.|||.||:|||.||..|||.|.|:|||||||||.:|:|.|
Zfish    69 ERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDNVCKILVGNKNDDPSKKLVDT 133

  Fly   133 EDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTS-----PNEQQKDTLHL---KP 189
            :||.||.:.:.:.|||||||:|||||.||::.|..||..|.::.     ..|::|||:|:   :.
Zfish   134 QDAMRFGESVGVRLFETSAKENINVEEMFMAFTHMVLRAKKQSQSRAEREREREKDTVHINSHRD 198

  Fly   190 NPKGSKGGKCC 200
            ..:..||.|||
Zfish   199 RERRKKGKKCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 135/206 (66%)
si:dkey-16l2.16XP_021327130.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..209 CDD:476819 133/204 (65%)

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