DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab35 and rab9b

DIOPT Version :10

Sequence 1:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_001339262.1 Gene:rab9b / 100003363 ZFINID:ZDB-GENE-091118-112 Length:202 Species:Danio rerio


Alignment Length:205 Identity:76/205 - (37%)
Similarity:116/205 - (56%) Gaps:21/205 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRT 72
            |.|::::||.|||||||:.|:..|.|......||||:|..|.::|:|..|.||||||||||||::
Zfish     7 LLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIWDTAGQERFKS 71

  Fly    73 ITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDV-----VKKVLVGNKNDDPDRKVVIT 132
            :.:.:|||....::.:.|.:.:||.|:..|.:|.....||     ...|::|||.|..:|:|. .
Zfish    72 LRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVVLGNKVDKEEREVG-E 135

  Fly   133 EDAQRFAKQMD-IELFETSAKDNINVENMFLSITRQVL------DHKLRTSPNEQQKDTLHLKPN 190
            ::|:.:.::.. ...|||||||:.||...|.:..|:||      ||.|.:|       ::.|..|
Zfish   136 DEARAWCEENGCCPYFETSAKDDTNVGAAFEAAVREVLASEDPIDHTLLSS-------SIDLHGN 193

  Fly   191 PKGSKGGKCC 200
            .|.:: ..||
Zfish   194 RKVTR-SSCC 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab35NP_608373.1 Rab35 3..201 CDD:133310 76/205 (37%)
rab9bXP_001339262.1 Rab9 3..172 CDD:206697 65/165 (39%)

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