DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment fd19B and Foxm1

DIOPT Version :9

Sequence 1:	NP_608369.1	Gene:	fd19B / 33010	FlyBaseID:	FBgn0031086	Length:	260	Species:	Drosophila melanogaster
Sequence 2:	NP_113821.2	Gene:	Foxm1 / 58921	RGDID:	61807	Length:	771	Species:	Rattus norvegicus

Alignment Length:	111	Identity:	43/111 - (38%)
Similarity:	59/111 - (53%)	Gaps:	20/111 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 SSSSNSSSDSMAAKSNAKPAFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYR-TRKSVW-- 102
            |.:|.|..||:    :.:|.::|.|:|..||.|:..||:||..|..||.|:|||:: ..|..|
  Rat   222 SRASVSWQDSV----SERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKC 282

  Fly   103 ----------QNSIRHNLSLNPFFVRVPRALDDPGRGHYWALDPYA 138
                      ||||||||||:..|||...|   .|:..:|.:.|.|
  Rat   283 WHQAYHKLGPQNSIRHNLSLHDMFVRETSA---NGKVSFWTIHPSA 325

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
fd19B	NP_608369.1	FH	58..135	CDD:238016	36/89 (40%)
Foxm1	NP_113821.2	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..54
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	94..165
		FH	235..322	CDD:238016	36/89 (40%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	340..361
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	542..568
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	584..655
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	693..718
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG2294
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1270467at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820