DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd19B and foxb2

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_005162532.1 Gene:foxb2 / 559714 ZFINID:ZDB-GENE-081104-320 Length:318 Species:Danio rerio


Alignment Length:192 Identity:65/192 - (33%)
Similarity:84/192 - (43%) Gaps:54/192 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NSSSDSMAAKSNAKPAFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHN 109
            ||.||.       ||.::|.:|..|||.|.|||.|.||.|.|:|.|.|||||.....||||:|||
Zfish     7 NSYSDQ-------KPPYSYISLTAMAIQSCSEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHN 64

  Fly   110 LSLNPFFVRVPRALDDPGRGHYWALDPYAEDLSIGETTGRLRRSNWQQNTGARPKVTGHPYQRMP 174
            ||.|..|:::||..|.||:|.:|||.|...|:                                 
Zfish    65 LSFNDCFIKIPRRPDQPGKGSFWALHPDCGDM--------------------------------- 96

  Fly   175 YYGHGHGNGPYIKAHSAYFPIMDHQHHAAMVQHYQAMMHRYQMMPHPHHH-QHQHQHQHPHS 235
                 ..||.:::.... |.::..:|.|.   ....::|.|    |.||| ||.....|.||
Zfish    97 -----FENGSFLRRRKR-FKLLRVEHSAC---KSSPLLHSY----HSHHHTQHSLHQSHHHS 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 42/76 (55%)
foxb2XP_005162532.1 FH 13..101 CDD:214627 46/125 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.