DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd19B and foxh1

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001017084.1 Gene:foxh1 / 549838 XenbaseID:XB-GENE-1194372 Length:515 Species:Xenopus tropicalis


Alignment Length:199 Identity:57/199 - (28%)
Similarity:93/199 - (46%) Gaps:39/199 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SKH--NSGSSFSSCSSSSSNSSS----DSMAAKSN-------AKPAFTYSALIVMAIWSSSEKRL 79
            |.|  :.|:...||:.:.....|    ::::.||.       |||.::|.|:|.:.|.:|.||||
 Frog    67 SMHGLSPGTQEGSCTQAEGTKDSLGGDETLSRKSKKKNYHRYAKPPYSYLAMIALVIQNSPEKRL 131

  Fly    80 TLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALDDPG----RGHYWALDPYAED 140
            .||.|.|.::..||:::.....|::|||||||.|..|.:|   |.|||    :|::|.:|.....
 Frog   132 KLSQILKEVSTLFPFFKGDYMGWKDSIRHNLSSNDCFKKV---LKDPGKPQAKGNFWTVDVSRIP 193

  Fly   141 LSIGETTGRLRRSNWQQNTGARPKVTGHPYQRM-PY----YGHGHGNGPY----IKAHSAYFPIM 196
            |...:.          |||......:.:..|.: ||    |.:.|....|    :.:|::..|:.
 Frog   194 LDAMKL----------QNTALTRGGSDYFVQDLAPYILHNYKYEHNVVVYAPHHMPSHASSLPLA 248

  Fly   197 DHQH 200
            :..|
 Frog   249 EDPH 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 34/80 (43%)
foxh1NP_001017084.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..103 8/35 (23%)
FH 110..188 CDD:238016 34/80 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..399
SMAD-interaction domain (SID) 377..503
Fast/FoxH1 motif 1 (FM1). /evidence=ECO:0000255 402..406
Fast/FoxH1 motif 2 (FM2). /evidence=ECO:0000255 412..418
SMAD-interaction motif (SIM) 467..488
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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