DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd19B and foxd1

DIOPT Version :9

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001008148.1 Gene:foxd1 / 493510 XenbaseID:XB-GENE-488077 Length:329 Species:Xenopus tropicalis


Alignment Length:186 Identity:72/186 - (38%)
Similarity:93/186 - (50%) Gaps:37/186 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KPAFTYSALIVMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRA 122
            ||.::|.|||.|||..|.:||||||.||::|::.|||||.:...||||||||||||..||::||.
 Frog    68 KPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPRE 132

  Fly   123 LDDPGRGHYWALDPYAEDL-SIGETTGRLRRSNWQQNTGARPKVTGHPYQRMPYYGHGHGNGPYI 186
            ..:||:|:||.|||.:.|: ..|....|.:|...||   |...|...|...:|...:.:  |||.
 Frog   133 PGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQQ---APELVLREPGHFLPASAYSY--GPYS 192

  Fly   187 KAHSAYFPIMDHQHHAAMVQHYQAMMHRYQMMP-HPH------HHQHQHQHQHPHS 235
            .|:.                        .|:.| |||      ..|.|...|.|.|
 Frog   193 CAYG------------------------IQLQPFHPHSALIAFQQQQQQARQQPPS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 FH 58..135 CDD:238016 45/76 (59%)
foxd1NP_001008148.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63
Forkhead 68..153 CDD:365978 49/84 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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