Protein Alignment fd19B and foxa1

DIOPT Version :10

• Sequence 1: NP_608369.1
• Gene: fd19B / 33010
• FlyBaseID: FBgn0031086
• Length: 260
• Species: Drosophila melanogaster
• Sequence 2: NP_571359.2
• Gene: foxa1 / 30541
• ZFINID: ZDB-GENE-990415-78
• Length: 427
• Species: Danio rerio
• Alignment Length: 270
• Identity: 81/270 - (30%)
• Similarity: 121/270 - (44%)
• Gaps: 61/270 - (22%)

  Fly    28 SKHNSGSSFSSCSSSSSNSSSDSMA------AKSN---------AKPAFTYSALIVMAIWSSSEK 77
            ::|:|.::.:..:|.|...||.:.|      |:.|         |||.::|.:||.|||..:..|
Zfish   112 AQHSSMNALNPYTSMSPTMSSMTYAQPNLNRARDNKTFRRSYPHAKPPYSYISLITMAIQQAPSK 176

  Fly    78 RLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALDDPGRGHYWALDPYAEDLS 142
            .||||.|.:||.|.|||||..:..|||||||:||.|..||:|.|:.|.||:|.||.|.|  :..:
Zfish   177 MLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVSRSPDKPGKGSYWTLHP--DSGN 239

  Fly   143 IGETTGRLRRS----------NWQQNTGARPKV--TGHPYQRMPYYGHGHGNGPYIKA--HSAYF 193
            :.|....|||.          :.:::.|.|.:.  :|.|..........|.:...|.:  .|:..
Zfish   240 MFENGCYLRRQKRFKCDKKLPDGKRSEGKREQSSGSGSPASDSTSSKPVHMDSSSITSSNQSSSP 304

  Fly   194 PIMDH---------------QHH--AAMVQHYQAMMHRYQMMPH----PHHHQHQHQHQHPHS-- 235
            |.:||               |.|  :..:....:|.|..|:  |    ||     :...||.|
Zfish   305 PSLDHRSGSSANSELKSGGPQVHPVSTSLSSLHSMAHESQL--HLKGDPH-----YSFNHPFSIN 362

  Fly   236 HFIQQSKPLH 245
            :.:..|:..|
Zfish   363 NLMSSSEQQH 372

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fd19B	NP_608369.1	Forkhead	58..140	CDD:459732	44/81 (54%)
foxa1	NP_571359.2	Forkhead_N	17..156	CDD:369872	9/43 (21%)
		FH_FOXA1	145..255	CDD:410812	50/111 (45%)
		HNF_C	356..416	CDD:430552	5/17 (29%)