DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fd19B and foxd2

DIOPT Version :10

Sequence 1:NP_608369.1 Gene:fd19B / 33010 FlyBaseID:FBgn0031086 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:248 Identity:81/248 - (32%)
Similarity:117/248 - (47%) Gaps:52/248 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VDKKEESPISKHNSGSSFSSCSSSSSNSSSDSMAAKSNA----------------KPAFTYSALI 67
            :|...:..:|: |:|....|...||.:..:|.:..:.::                ||.::|.|||
Zfish    41 LDNDSDDNLSQ-NAGEGAISPGQSSLDCPADRVGQRDDSRTGALTGDKPGKNALVKPPYSYIALI 104

  Fly    68 VMAIWSSSEKRLTLSGICKWIADNFPYYRTRKSVWQNSIRHNLSLNPFFVRVPRALDDPGRGHYW 132
            .|||..|.:||||||.||::|::.|||||.:...||||||||||||..||::||...:||:|:||
Zfish   105 TMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYW 169

  Fly   133 ALDPYAEDL-SIGETTGRLRRSNWQQNTGARPKVTGHPYQRMPYYGHGHGNGPYIKAHSAYFPIM 196
            .|||.:.|: ..|....|.:|....|......:..|.    :|    |.|.|||     .|    
Zfish   170 TLDPESADMFDNGSFLRRRKRFKRHQTNEILREAGGF----LP----GFGYGPY-----GY---- 217

  Fly   197 DHQHHAAMVQHYQAMMHRYQMMPHPHHHQHQHQHQHPHSHFIQQSKPLHIQEP 249
               ::...:|::           |.||..|.|   ||.|.|..|:....:..|
Zfish   218 ---NYGLQLQNF-----------HAHHPYHPH---HPGSAFPFQNTHCALPTP 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd19BNP_608369.1 Forkhead 58..140 CDD:459732 48/81 (59%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 52/97 (54%)

Return to query results.
Submit another query.